Package index • PTMsToPathways

All functions

BuildClusterFilteredNetwork(): Build PPI Network

GetSTRINGdb(): Get STRINGdb PPI data

MakeClusterList(): Build Clusters Based on PTM Data Under Like Conditions

MakeCorrelationNetwork(): Make Correlation Network

MakeDBInput(): Make Database Input File

PathwayCrosstalkNetwork(): Pathway Crosstalk Network

ProcessGMEdgefile(): Process GM Edge File

formatKinsubTable(): Format Kinsub Table

getFuncKey(): Graphing and Manipulating Cluster Filtered Network

`%w/o%`: Set difference for vectors using custom infix operator

make.genepep.edges(): Title

ptms_to_cfn(): Extracts co-clustered PTM and gene network from a cluster filtered network object.

remove.autophos(): Title

setCorrEdgeAppearance(): Title