Skip to contents

DESCRIPTION

Usage

ex.funckey

Format

Dataframe of 24339 rows and 8 columns:

Gene.Name

Name of the gene

Approved.Name

Name of the protein

Hugo.Gene.Family

Family of the gene

HPRD.Function

Function of the protein

nodeType

Type of protein

Domains

Known domains of protein

Compartment

Location of the protein

Compartment.Overview

Alternate location of the protein

Source

""

Examples

head(ex.funckey)
#>   Gene.Name                     Approved.Name
#> 1      A1BG            alpha-1-B glycoprotein
#> 2      A1CF    APOBEC1 complementation factor
#> 3     A2LD1                         undefined
#> 4       A2M             alpha-2-macroglobulin
#> 5     A2ML1      alpha-2-macroglobulin-like 1
#> 6   A3GALT2 alpha 1,3-galactosyltransferase 2
#>                        Hugo.Gene.Family
#> 1 Immunoglobulin-like domain containing
#> 2          RNA binding motif containing
#> 3                             undefined
#> 4                             undefined
#> 5                             undefined
#> 6          Glycosyltransferase family 6
#>                                 HPRD.Function
#> 1     Molecular function unknown (GO:0005554)
#> 2                    RNA binding (GO:0003723)
#> 3     Molecular function unknown (GO:0005554)
#> 4    Protease inhibitor activity (GO:0030414)
#> 5    Protease inhibitor activity (GO:0030414)
#> 6 Galactosyltransferase activity (GO:0008378)
#>                             nodeType   Domains             Compartment
#> 1                          undefined      IGC2               undefined
#> 2 RNA binding and processing protein       RRM RNA-associated; nucleus
#> 3                          undefined undefined               undefined
#> 4                          undefined       A2M      cytosol; secretion
#> 5                          undefined undefined               undefined
#> 6                          undefined        TM               undefined
#>   Compartment.Overview
#> 1      plasma.membrane
#> 2       RNA.associated
#> 3            undefined
#> 4      plasma.membrane
#> 5      plasma.membrane
#> 6            undefined