Filter PPI Network by Known Clusters

All edges in the PPI network are checked against the cocluster correlation network to ensure existence and a non-zero weight. If either of these conditions are not met, then it will be removed from the list of PPI edges. This new, cluster filtered network is then assigned to the global namespace.

ClusterFilteredNetwork(cccn.matrix, ppi.network, cfn.name = "cfn")

Arguments

cccn.matrix

Matrix representing the common clusters from the three distance calculations' clusters

ppi.network

A data frame of combined edges from STRINGdb and provided database entries

cfn.name

Desired name of the output cluster filtered network

Value

cluster filtered network

Examples

ClusterFilteredNetwork(ex.cccn.matrix, ex.ppi.network, cfn.name = "example.cfn")
#> Error in ClusterFilteredNetwork(ex.cccn.matrix, ex.ppi.network, cfn.name = "example.cfn"): No common edges between PPI edges and cccn.matrix