This is the supporting package for the projects in the papers listed below.
Please feel free to reach out with errors, critiques, or questions.
Installation
Before proceeding, ensure you have R installed. You will also need the devtools package, which can be installed with:
install.packages("devtools")Then you can do:
devtools::install_github("UM-Applied-Algorithms-Lab/PTMsToPathways")Usage
After installation, load the package in R with:
library(PTMsToPathways)You can then use the available functions as described in the package documentation.
Development & Contribution
If you wish to modify or contribute to the package, we provide instructions on how to clone our repository, as well as an in depth look at some our solutions on our wiki